Category: Publication / Data source: 3 selected - Universitätsbibliographie Search Results

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1. rapidGSEA: Speeding up gene set enrichment analysis on multi-core CPUs and CUDA-enabled GPUs

Autoren:: Hundt, Christian; Hildebrandt, Andreas; Schmidt, Bertil
Veröffentlichungsdatum:: 2016
Type:: Journal article

2. MSAProbs-MPI: parallel multiple sequence aligner for distributed-memory systems

Autoren:: Gonzalez-Dominguez, Jorge; Liu, Yongchao; Tourino, Juan; Schmidt, Bertil
Veröffentlichungsdatum:: 2016
Type:: Journal article

3. kmcEx: memory-frugal and retrieval-efficient encoding of counted k-mers

Autoren:: Jiang, Peng; Luo, Jie; Wang, Yiqi; Deng, Pingji; Schmidt, Bertil; Tang, Xiangjun; Chen, Ningjiang; Wong, Limsoon; Zhao, Liang
Editoren:: Berger, Bonnie
Veröffentlichungsdatum:: 2019
Type:: Journal article

4. Fast and efficient short read mapping based on a succinct hash index

Autoren:: Zhang, Haowen; Chan, Yuandong; Fan, Kaichao; Schmidt, Bertil; Liu, Weiguo
Veröffentlichungsdatum:: 2018
Type:: Journal article

5. CLOVE: classification of genomic fusions into structural variation events

Autoren:: Schroder, Jan; Wirawan, Adrianto; Schmidt, Bertil; Papenfuss, Anthony T
Veröffentlichungsdatum:: 2017
Type:: Journal article

6. Parallel algorithms for large-scale biological sequence alignment on Xeon-Phi based clusters

Autoren:: Lan, Haidong; Chan, Yuandong; Xu, Kai; Schmidt, Bertil; Peng, Shaoliang; Liu, Weiguo
Veröffentlichungsdatum:: 2016
Type:: Journal article

7. Parallel and Space-Efficient Construction of Burrows-Wheeler Transform and Suffix Array for Big Genome Data

Autoren:: Liu, Yongchao; Hankeln, Thomas; Schmidt, Bertil
Veröffentlichungsdatum:: 2016
Type:: Journal article

8. SNVSniffer: an integrated caller for germline and somatic single-nucleotide and indel mutations

Autoren:: Liu, Yongchao; Loewer, Martin; Aluru, Srinivas; Schmidt, Bertil
Veröffentlichungsdatum:: 2016
Type:: Journal article

9. A Parallel Algorithm for Error Correction in High-Throughput Short-Read Data on CUDA-Enabled Graphics Hardware

Autoren:: Shi, Haixiang; Schmidt, Bertil; Liu, Weiguo; Mueller-Wittig, Wolfgang
Veröffentlichungsdatum:: 2010
Type:: Journal article

10. Efficient and Accurate OTU Clustering with GPU-Based Sequence Alignment and Dynamic Dendrogram Cutting

Autoren:: Thuy-Diem, Nguyen; Schmidt, Bertil; Zheng, Zejun; Kwoh, Chee-Keong
Veröffentlichungsdatum:: 2015
Type:: Journal article