Author: Liu, Yongchao / Organizational unit: JGU / Data source: DBLP and Europe PubMed Central - Universitätsbibliographie Search Results

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1. MSAProbs-MPI: parallel multiple sequence aligner for distributed-memory systems

Autoren:: Gonzalez-Dominguez, Jorge; Liu, Yongchao; Tourino, Juan; Schmidt, Bertil
Veröffentlichungsdatum:: 2016
Type:: Journal article

2. Parallel and Space-Efficient Construction of Burrows-Wheeler Transform and Suffix Array for Big Genome Data

Autoren:: Liu, Yongchao; Hankeln, Thomas; Schmidt, Bertil
Veröffentlichungsdatum:: 2016
Type:: Journal article

3. SNVSniffer: an integrated caller for germline and somatic single-nucleotide and indel mutations

Autoren:: Liu, Yongchao; Loewer, Martin; Aluru, Srinivas; Schmidt, Bertil
Veröffentlichungsdatum:: 2016
Type:: Journal article

4. DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI

Autoren:: Liu, Yongchao; Schmidt, Bertil; Maskell, Douglas L
Veröffentlichungsdatum:: 2011
Type:: Journal article

5. CompleteMOTIFs: DNA motif discovery platform for transcription factor binding experiments

Autoren:: Kuttippurathu, Lakshmi; Hsing, Michael; Liu, Yongchao; Schmidt, Bertil; Maskell, Douglas L; Lee, Kyungjoon; He, Aibin; Pu, William T; Kong, Sek Won
Veröffentlichungsdatum:: 2011
Type:: Journal article

6. MSAProbs: multiple sequence alignment based on pair hidden Markov models and partition function posterior probabilities

Autoren:: Liu, Yongchao; Schmidt, Bertil; Maskell, Douglas L
Veröffentlichungsdatum:: 2010
Type:: Journal article

7. Long read alignment based on maximal exact match seeds

Autoren:: Liu, Yongchao; Schmidt, Bertil
Veröffentlichungsdatum:: 2012
Type:: Journal article

8. CUSHAW: a CUDA compatible short read aligner to large genomes based on the Burrows-Wheeler transform

Autoren:: Liu, Yongchao; Schmidt, Bertil; Maskell, Douglas L
Veröffentlichungsdatum:: 2012
Type:: Journal article

9. Musket: a multistage k-mer spectrum-based error corrector for Illumina sequence data

Autoren:: Liu, Yongchao; Schroeder, Jan; Schmidt, Bertil
Veröffentlichungsdatum:: 2013
Type:: Journal article

10. CUDASW++ 3.0 : accelerating Smith-Waterman protein database search by coupling CPU and GPU SIMD instructions

Autoren:: Liu, Yongchao; Wirawan, Adrianto; Schmidt, Bertil
Veröffentlichungsdatum:: 2013
Type:: Journal article