An In-Depth View of the Porcine Trabecular Meshwork Proteome
- Publikationstyp:
- Zeitschriftenaufsatz
- Metadaten:
-
- Abstract
- <jats:p>The house swine (Sus scrofa domestica Linnaeus 1758) is an important model organism regarding the study of neurodegenerative diseases, especially ocular neuropathies such as glaucoma. This is due to the high comparability of the porcine and human eye regarding anatomy and molecular features. In the pathogenesis of glaucoma, the trabecular meshwork (TM) forms a key ocular component in terms of intraocular pressure (IOP) elevation. Thereby, functional TM abnormalities are correlated with distinct proteomic alterations. However, a detailed analysis of the TM proteome has not been realized so far. Since the porcine eye has high potential as a model system to study ocular diseases such as glaucoma, the present study focuses on the in-depth analysis of the porcine TM proteome. By use of a bottom-up (BU) mass spectrometric (MS) platform utilizing electrospray ionization liquid chromatography tandem MS (LC-ESI-MS/MS) considering database-dependent and peptide de novo sequencing, more than 3000 TM proteins were documented with high confidence (FDR < 1%). A distinct number of proteins with neuronal association were revealed. To the best to our knowledge, many of these protein species have not been reported for TM tissue before such as reelin, centlein and high abundant neuroblast differentiation-associated protein AHNAK (AHNAK). Thereby, AHNAK might play a superordinate role in the TM regarding proposed tissue involvement in barrier function. Also, a high number of secretory proteins could be identified. The generated TM proteomic landscape underlines a multifunctional character of the TM beyond representing a simple drainage system. Finally, the protein catalogue of the porcine TM provides an in-depth view of the TM molecular landscape and will serve as an important reference map in terms of glaucoma research utilizing porcine animal models, porcine TM tissues and/or cultured TM cells.</jats:p>
- Autoren
- Sebastian Funke
- Vanessa M Beutgen
- Lea Bechter
- Carsten Schmelter
- Vanessa Zurawski
- Natarajan Perumal
- Norbert Pfeiffer
- Franz H Grus
- DOI
- 10.3390/ijms20102526
- eISSN
- 1422-0067
- Ausgabe der Veröffentlichung
- 10
- Zeitschrift
- International Journal of Molecular Sciences
- Sprache
- en
- Online publication date
- 2019
- Paginierung
- 2526 - 2526
- Status
- Published online
- Herausgeber
- MDPI AG
- Herausgeber URL
- http://dx.doi.org/10.3390/ijms20102526
- Datum der Datenerfassung
- 2022
- Titel
- An In-Depth View of the Porcine Trabecular Meshwork Proteome
- Ausgabe der Zeitschrift
- 20
Datenquelle: Crossref
- Andere Metadatenquellen:
-
- Author's licence
- CC-BY
- Autoren
- Sebastian Funke
- Vanessa M Beutgen
- Lea Bechter
- Carsten Schmelter
- Vanessa Zurawski
- Natarajan Perumal
- Norbert Pfeiffer
- Franz-Hermann Grus
- Hosting institution
- Universitätsbibliothek Mainz
- Sammlungen
- JGU-Publikationen
- Resource version
- Published version
- URN
- urn:nbn:de:hebis:77-publ-595234
- DOI
- 10.3390/ijms20102526
- Funding acknowledgements
- DFG, Open Access-Publizieren Universität Mainz / Universitätsmedizin
- File(s) embargoed
- false
- Open access
- true
- ISSN
- 1422-0067
- Ausgabe der Veröffentlichung
- 10
- Zeitschrift
- International journal of molecular sciences
- Schlüsselwörter
- 610 Medizin
- 610 Medical sciences
- Sprache
- eng
- Open access status
- Open Access
- Paginierung
- Art. 2526
- Datum der Veröffentlichung
- 2019
- Public URL
- https://openscience.ub.uni-mainz.de/handle/20.500.12030/26
- Herausgeber
- Molecular Diversity Preservation International
- Herausgeber URL
- http://dx.doi.org/10.3390/ijms20102526
- Datum der Datenerfassung
- 2020
- Datum, an dem der Datensatz öffentlich gemacht wurde
- 2020
- Zugang
- Public
- Titel
- An in-depth view of the porcine trabecular meshwork proteome
- Ausgabe der Zeitschrift
- 20
Files
59523.pdf
Datenquelle: OPENSCIENCE.UB